Sequence and Structural Databases
Description: GATE CSIRNET SLET AIEEE IITJEE | |
Number of Questions: 15 | |
Created by: Amit Pandey | |
Tags: GATE Sequence and Structure Databases |
Which of the following programs queries protein sequences to a nucleotide sequence database with the sequences translated in all six reading frames?
Which among the following BLAST programs are used to study the sequence-structure-function relationship of nucleotide sequences?
- Blastp
- MEGABLAST
- Blastn
- PSI-BLAST
Which of the following are examples of progressive alignment programs?
- PRRN
- DIALIGN2
- Match-Box
- Clustal
- Poa
Which among the following programs is a web-based program that predicts promoters for human DNA?
Which of the following programs is able to do both simple sequence format conversions as well as alignment format conversions?
Which among the following is a web-based program that predicts promoters containing a high density of CpG islands in mammalian genomic sequences?
Which of the following databases is/are not Nucleotide Sequence Database (INSD)?
- VectorBase
- ENA
- GenBank
- PROSITE
Which among the following is/are protein databases?
- UniProt
- InterPro
- SCOP
- ModBase
- OMIM
Which of the following databases gives information of interactions between environmental chemicals and gene products and their relationships to diseases?
The signal transduction pathway databases are __________
The phylogenetic database is _______
The database which is related to ribosomal RNAs is _______
Which of the following databases contains a collection of online databases dealing with genomes, enzymatic pathways and biochemicals?
Which of the following databases gives information about enzymes involved in the synthesis, metabolism and transport of saccharide?
Match the column – I with column – II ||| |---|---| |Column – I|Column – II| |A. MEDLARS Online|1. Nucleotide sequence database| |B. DDBJ|2. Bibliographic database| |C. NatureServe, Inc.|3. Model organism database| |D. WormBase|4. Biodiversity database|